Record Information
Version1.0
Creation Date2016-07-13 19:44:14 UTC
Update Date2020-03-13 18:12:30 UTC
LmdbLMDB00186
Secondary Accession NumbersNone
Metabolite Identification
Common NameSodium
DescriptionSodium, also known as Na+ or sodium ion, belongs to the class of inorganic compounds known as homogeneous alkali metal compounds. These are inorganic compounds containing only metal atoms,with the largest atom being a alkali metal atom. Sodium is a weakly acidic compound (based on its pKa). Sodium exists in all living species, ranging from bacteria to humans. In humans, sodium is involved in the metabolic disorder called the triamterene action pathway. Outside of the human body, Sodium has been detected, but not quantified in, several different foods, such as cashew nuts, sugar apples, oregon yampahs, hazelnuts, and turnips. This could make sodium a potential biomarker for the consumption of these foods. Physiologically, it exists as an ion in the body. Sodium, with regard to humans, has been found to be associated with several diseases such as lipoid congenital adrenal hyperplasia, congenital secretory diarrhea, bartter syndrome, type 4b, neonatal, with sensorineural deafness, and adrenal hyperplasia, congenital, due to 3-beta-hydroxysteroid dehydrogenase 2 deficiency; sodium has also been linked to the inborn metabolic disorder primary hypomagnesemia. Sodium ions are necessary for regulation of blood and body fluids, transmission of nerve impulses, heart activity, and certain metabolic functions. Sodium is needed by animals, which maintain high concentrations in their blood and extracellular fluids, but the ion is not needed by plants. For certain people with salt-sensitive blood pressure, this extra intake may cause a negative effect on health. Most people consume far more sodium than is physiologically needed.
Structure
Thumb
Synonyms
ValueSource
Na(+)ChEBI
Na+ChEBI
SODIUM ionChEBI
Sodium(1+)Kegg
Chemical FormulaNa
Average Molecular Weight22.9898
Monoisotopic Molecular Weight22.989769675
IUPAC Namesodium(1+) ion
Traditional Namesodium(1+) ion
CAS Registry Number7440-23-5
SMILES
[Na+]
InChI Identifier
InChI=1S/Na/q+1
InChI KeyFKNQFGJONOIPTF-UHFFFAOYSA-N
Chemical Taxonomy
Description belongs to the class of inorganic compounds known as homogeneous alkali metal compounds. These are inorganic compounds containing only metal atoms,with the largest atom being a alkali metal atom.
KingdomInorganic compounds
Super ClassHomogeneous metal compounds
ClassHomogeneous alkali metal compounds
Sub ClassNot Available
Direct ParentHomogeneous alkali metal compounds
Alternative ParentsNot Available
Substituents
  • Homogeneous alkali metal
Molecular FrameworkNot Available
External Descriptors
Ontology
StatusDetected and Quantified
OriginNot Available
BiofunctionNot Available
ApplicationNot Available
Cellular locationsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-0.77ChemAxon
pKa (Strongest Acidic)3.09ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area0 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity0 m³·mol⁻¹ChemAxon
Polarizability1.78 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleYesChemAxon
Spectra
Spectra
Spectrum TypeDescriptionSplash KeyView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10V, Positivesplash10-00di-9000000000-25bf08b0ab99f8116a31Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 20V, Positivesplash10-00di-9000000000-25bf08b0ab99f8116a31Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 40V, Positivesplash10-00di-9000000000-25bf08b0ab99f8116a31Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10V, Negativesplash10-00di-9000000000-fba837e9c7559de06780Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 20V, Negativesplash10-00di-9000000000-fba837e9c7559de06780Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 40V, Negativesplash10-00di-9000000000-fba837e9c7559de06780Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10V, Positivesplash10-00di-9000000000-1d278094c49273af723fSpectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 20V, Positivesplash10-00di-9000000000-1d278094c49273af723fSpectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 40V, Positivesplash10-00di-9000000000-1d278094c49273af723fSpectrum
Biological Properties
Cellular LocationsNot Available
Biofluid Locations and Tissue Locations
  • Follicular Fluid
  • Milk
  • Plasma
  • Ruminal Fluid
  • Serum
Concentrations
BiofluidStatusValueConditionSpeciesReferenceDetails
Follicular FluidDetected and Quantified109613.975 uMNot AvailableBovine
    • C. Lutwak-Mann. N...
details
Follicular FluidDetected and Quantified134000 +/- 2000 uMNot AvailablePorcine details
MilkDetected and Quantified1270 mg/kgNot AvailableOvine details
MilkDetected and Quantified1280 mg/kgNot AvailableOvine details
MilkDetected and Quantified1300 mg/kgNot AvailableOvine details
MilkDetected and Quantified1360 mg/kgNot AvailableOvine details
MilkDetected and Quantified1380 mg/kgNot AvailableOvine details
MilkDetected and Quantified1420 mg/kgNot AvailableOvine details
MilkDetected and Quantified580 mg/kgNot AvailableBovine
    • Park, Y. W; Juáre...
details
MilkDetected and Quantified440 mg/kgNot AvailableOvine
    • Park, Y. W; Juáre...
details
MilkDetected and Quantified410 mg/kgNot AvailableCaprine
    • Park, Y. W; Juáre...
details
MilkDetected and Quantified430 mg/kgNot AvailableBovine details
MilkDetected and Quantified450 mg/kgNot AvailableBovine details
MilkDetected and Quantified450 mg/kgNot AvailableBovine details
MilkDetected and Quantified450 mg/kgNot AvailableBovine details
MilkDetected and Quantified450 mg/kgNot AvailableBovine details
MilkDetected and Quantified460 mg/kgNot AvailableBovine details
MilkDetected and Quantified480 mg/kgNot AvailableBovine details
MilkDetected and Quantified480 mg/kgNot AvailableBovine details
MilkDetected and Quantified490 mg/kgNot AvailableBovine details
MilkDetected and Quantified500 mg/kgNot AvailableBovine details
MilkDetected and Quantified530 mg/kgNot AvailableBovine details
MilkDetected and Quantified580 mg/kgNot AvailableBovine details
PlasmaDetected and Quantified138600 +/- 880 uMNot AvailableBovine
    • Abdullah BAŞOĞLU,...
details
PlasmaDetected and Quantified140170 +/- 850 uMNot AvailableBovine
    • Abdullah BAŞOĞLU,...
details
PlasmaDetected and Quantified142500 +/- 1110 uMNot AvailableBovine
    • Abdullah BAŞOĞLU,...
details
Ruminal FluidDetected and Quantified86081.769 uMNot AvailableOvine
    • M.L.K. Bonsi, P.O...
details
Ruminal FluidDetected and Quantified71249.0839-75642.342 uMNot AvailableOvine
    • M.L.K. Bonsi, P.O...
details
Ruminal FluidDetected and Quantified74641.897-76773.280 uMNot AvailableOvine
    • M.L.K. Bonsi, P.O...
details
Ruminal FluidDetected and Quantified99,347 uMNot AvailableBovine
    • Saleem F, Bouatra...
details
Ruminal FluidDetected and Quantified113,362 +/- 3,434 uMNot AvailableBovine
    • Saleem F, Bouatra...
details
SerumDetected and Quantified168935.45 +/- 36545.46 uMNot AvailableOvine
    • Candidate serum m...
details
SerumDetected and Quantified147000 +/- 2000 uMNot AvailablePorcine details
SerumDetected and Quantified141000 uMNot AvailableBovine details
SerumDetected and Quantified143000 uMNot AvailableBovine details
DrugBank IDNot Available
HMDB IDHMDB0000588
FooDB IDFDB031052
Phenol Explorer IDNot Available
KNApSAcK IDNot Available
BiGG ID37376
BioCyc IDNot Available
METLIN ID3192
PDB IDNot Available
Wikipedia LinkSodium
Chemspider ID899
ChEBI ID29101
PubChem Compound ID923
Kegg Compound IDC01330
YMDB IDYMDB00020
ECMDB IDECMDB02908
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available